Data was first organized and collaborated on with a combination of google sheets and excel.
Study ID:
Timepoint
VUM-003
Hospital discharge
-
10/25/20 14:41
VUM-005
Hospital discharge
Session ID-
Date and Time:
11/6/20 14:04
Pulse Ox Level
Complications
VUM-005
12-month Follow-up
Ely_243870
10/18/21 10:00
VUM-007
12-month Follow-up
ELY_244593
5/12/22 10:00
VUM-010
Hospital discharge
VUM-010
12-month Follow-up
Ely_245309
VUM-011
12-month Follow-up
Ely_247254
VUM-013
Hospital discharge
VUM-013
12-month Follow-up
VUM-019
Hospital discharge
VUM-020
Hospital discharge
VUM-020
12-month Follow-up
VUM-022
Hospital discharge
VUM-022
12-month Follow-up
VUM-027
VUM-028
VUM-028
12-month Follow-up
VUM-031
Hospital discharge
VUM-032
Hospital discharge
VUM-034
Hospital discharge
Patel_142248
VUM-034
12-month Follow-up
Ely_246606
7/7/22 13:00
96%
VUM-035
12-month Follow-up
ELY_247070
7/1/22 9:00
96%
VUM-038
Hospital discharge
ELY_132409
5/27/21 14:24
89%
motion_degraded
mri_result
MRI Location
No
Normal
VUMC- VUMC 3.0 Tesla
Yes - Mild
Normal
VUMC- VUMC 3.0 Tesla
Yes - Mild
Normal
VUMC - VUIIS 3.0 Tesla
3TB
Yes - Mild
Abnormal
VUMC - VUIIS 3.0 Tesla
3TB
Yes - Mild
Abnormal
VUMC- VUMC 3.0 Tesla
No
Type of Scanner Used:
Which machine was used?
-
1/27/21 13:40
Abnormal
VUMC - VUIIS 3.0 Tesla
3TB
No
Normal
VUMC - VUIIS 3.0 Tesla
3TB
-
1/27/21 10:30
No
Normal
VUMC- VUMC 3.0 Tesla
1/31/22 8:30
No
Normal
VUMC - VUIIS 3.0 Tesla
-
2/21/21 11:15
No
Normal
VUMC- VUMC 3.0 Tesla
-
2/14/21 18:17
No
Normal
VUMC- VUMC 3.0 Tesla
3/7/22 8:00
No
Normal
VUMC - VUIIS 3.0 Tesla
-
2/28/21 9:49
No
Normal
VUMC- VUMC 3.0 Tesla
3/31/22 9:30
No
Abnormal
VUMC - VUIIS 3.0 Tesla
Hospital discharge
-
3/19/21 18:03
Yes - Mild
Abnormal
VUMC- VUMC 3.0 Tesla
Hospital discharge
-
4/3/21 20:26
No
Normal
VUMC- VUMC 3.0 Tesla
No
Normal
VUMC - VUIIS 3.0 Tesla
No
Abnormal
VUMC- VUMC 3.0 Tesla
Yes - Mild
Abnormal
VUMC- VUMC 3.0 Tesla
No
Abnormal
VUMC - VUIIS 3.0 Tesla
3TA
No
Normal
VUMC - VUIIS 3.0 Tesla
3TB
No
Normal
VUMC - VUIIS 3.0 Tesla
3TB
No
Normal
VUMC - VUIIS 3.0 Tesla
3TA
3/29/22 8:30
7/20/22 9:00
Ely_244977
Ely_245517
Ely_245503
Ely_245894
5/2/22 11:-
4/14/21 9:48
-
4/13/21 23:25
99
98%
4/29/21 16:30
MRI technician forgot to obtain the
pule Ox level from patient prior or
following the scan
7/22/22 11:00
3TB
3TB
3TB
3TB
VUM-040
12-month Follow-up
Ely_246845
Yes - Mild
Normal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-042
Hospital discharge
ELY_142534
6/3/21 15:00
No
Normal
VUMC - VUIIS 3.0 Tesla
3TA
VUM-045
Hospital discharge
ELY_142748
6/24/21 14:00
No
Normal
VUMC - VUIIS 3.0 Tesla
3TA
VUM-056
Hospital discharge
Ely_143391
9/1/21 11:00
No
Abnormal
VUMC - VUIIS 3.0 Tesla
3TA
VUM-057
Hospital discharge
ELY_243320
8/23/21 14:00
No
Abnormal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-058
12-month Follow-up
Ely_247502
10/27/22 10:00
No
Normal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-059
Hospital discharge
Ely_143398
8/30/21 16:30
No
Normal
VUMC - VUIIS 3.0 Tesla
3TA
VUM-060
Hospital discharge
Ely_243426
9/14/21 10:30
Yes - Mild
Abnormal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-080
Hospital discharge
Ely_144158
11/3/21 14:30
No
Abnormal
VUMC - VUIIS 3.0 Tesla
3TA
VUM-086
Hospital discharge
Ely_144316
11/23/21 15:00
No
Abnormal
VUMC - VUIIS 3.0 Tesla
3TA
VUM-087
Hospital discharge
Ely_244248
11/10/21 15:00
No
Abnormal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-089
Hospital discharge
ELY_244317
11/18/21 11:00
Yes - Mild
Abnormal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-093
Hospital discharge
ELY_244503
12/3/21 10:30
Yes - Mild
Normal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-095
Hospital discharge
ELY_144790
VUM-098
12-month Follow-up
Ely_249537
2/27/23 9:00
VUM-099
Hospital discharge
Ely_244715
12/17/21 12:00
VUM-104
Hospital discharge
ELY_145192
3/3/22 13:53
VUM-104
12-month Follow-up
Ely_249526
3/23/23 7:30
VUM-107
Hospital discharge
ELY_145599
3/4/22 14:40
VUM-117
Hospital discharge
Ely_246130
95%
Some motion, patient coughing
Patient was unable to stay lying down
on back at around 14:20. He was
already on 4.5L oxygen during the
MRI scan but could not tolerate laying
still on his back any further. Thus,
scan was stopped at around 14:20.
Yes - Severe
12/23/21 14:00
Technically inadequate
VUMC - VUIIS 3.0 Tesla
3TA
Yes - Severe
Normal
VUMC - VUIIS 3.0 Tesla
3TB
Yes - Mild
Normal
VUMC - VUIIS 3.0 Tesla
3TB
No
Normal
VUMC - VUIIS 3.0 Tesla
3TA
No
Abnormal
VUMC - VUIIS 3.0 Tesla
3TB
Yes - Mild
Normal
VUMC - VUIIS 3.0 Tesla
3TA
5/11/22 10:00
Yes - Mild
Normal
VUMC - VUIIS 3.0 Tesla
3TB
95%
95%
VUM-117
12-month Follow-up
Ely_250139
7/5/23 8:00
Patient was unable to lie still during
one of the first scans and since these
are prioritized, this scan was repeated
92% and a later scan was lost.
Yes - Mild
Normal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-119
Hospital discharge
ELY_245882
3/31/22 12:00
Yes - Mild
Abnormal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-120
Hospital discharge
ELY_145875
4/8/22 16:20
No
Normal
VUMC - VUIIS 3.0 Tesla
3TA
VUM-120
12-month Follow-up
Ely_151002
6/14/23 9:00
95%
No
Normal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-127
12-month Follow-up
Ely_251780
8/22/23 11:00
95%
VUMC - VUIIS 3.0 Tesla
3TB
VUM-132
Hospital discharge
ELY_146997
7/19/22 14:00
98
No
Abnormal
VUMC - VUIIS 3.0 Tesla
3TA
VUM-132
12-month Follow-up
Ely_250445
6/15/23 11:00
97%
No
Abnormal
VUMC - VUIIS 3.0 Tesla
3TB
VUM-136
Hospital discharge
ELY_246795
6/1/22 8:00
Yes - Severe
Technically inadequate
VUMC - VUIIS 3.0 Tesla
3TB
No
Normal
VUMC - VUIIS 3.0 Tesla
3TB
Normal
VUMC - VUIIS 3.0 Tesla
3TB
Normal
VUMC - VUIIS 3.0 Tesla
3TB
Abnormal
VUMC - VUIIS 3.0 Tesla
3TA
VUM-137
Hospital discharge
VUM-140
Hospital discharge
ELY_246887
VUM-140
12-month Follow-up
Ely_251171
7/7/23 9:30
VUM-144
Hospital discharge
ELY_147008
8/24/22 13:00
Incomplete scan. Started late due to
patient not being where they said
they were.
6/9/22 10:-
7/13/22 12:00
some movement due to coughing, last
98 two scans aborted due to time.
Yes - Mild
This patient was unable to lie still
98% during one of the last scans.
94
No
The data was then organized into anonymized folders for sharing with others via Microsoft Sharepoint
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CIBS Center - Study BRAIN2
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May 14
Modified
Baker, Joshua
Modified By
BRA-218
Baker, Joshua
May 14
BRA-198
Baker, Joshua
April 2
BRA-195
Baker, Joshua
April 2
BRA-190
Baker, Joshua
April 2
BRA-189
Baker, Joshua
April 2
BRA-147
Baker, Joshua
April 2
BRA-188
Baker, Joshua
March 5
BRA-166
Baker, Joshua
March 5
BRA-178
Baker, Joshua
February 24
BRA-161
Baker, Joshua
February 24
Baker, Joshua
January 2
Count 61
BRA-169
Brazil Site
Phillips, Mike
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Neuroimaging Data
BRA-191
Name
CIBS Center - Studies
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The internal team used XNAT for automatic data
UPDATE
AUG 1how
2025to modify and store data
processing
so I learned
here, as well as load, remove, and check the analysis.
ACCRE has scheduled downtime Aug 19-21.
Processing on XNAT will be stopped beginning Aug 12. XNAT will be down beginning Aug 14. Service is anticipated to resume on Aug 22.
Please continue to be alert for pipeline failures, and contact-for assistance with any issues.
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PI: Landman, Bennett
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Subjects
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Subject
200
Label
- VUM-313
baseline_261602
- VUM-306
baseline_260454
- VUM-311
baseline_160805
- VUM-303
baseline_260240
- BRA-132
-_1
- VUM-247
month12_260232
- BRA-140
-_1
- VUM-231
month12_260081
- BRA-107
-_1
- VUM-300
baseline_159602
- VUM-298
baseline_259384
- VUM-241
month12_159379
- VUM-292
baseline_258628
- VUM-296
baseline_158812
- VUM-235
month12_158792
- BRA-161
baseline_-
- BRA-178
baseline_-
1 of 1 Pgs (142 Rows)
pulse_ox_level
complications
98
None
88
None
Reload
motion_degraded
Options
mri_result
version 1.8.6.1, build: 17
Finally the actual images were collected from xnat by individual researchers to view and write algorithms to analyze.